Histology scan bounding boxes

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Inheritance graph

Defined in file : brainvisa/toolboxes/bioprocessing/types/biology.py

Used in the following processes

Automatic bounding boxes detection
Histological scan spatial reorganization
Histological slices extraction
{Importer} Histology scan

Associated formats

JSON file

Associated ontology rules

  • brainvisa-3.2.0 :
    • {study}/{center}/histology/{scan_session}/scans/{marker}/{specie}_<marker>_serie{serie}_scan{scan_number}_boundingboxes

    Key attributes

  • brainvisa-3.2.0 :
    • study ,  center ,  scan_session ,  marker ,  specie ,  serie ,  scan_number